openghg_inversions

• openghg_inversions
  • openghg_inversions.basis
    • basis_functions_wrapper()
    • bucketbasisfunction()
    • fixed_outer_regions_basis()
    • quadtreebasisfunction()
    • openghg_inversions.basis.algorithms
      • quadtree_algorithm()
      • weighted_algorithm()
  • openghg_inversions.config
    • openghg_inversions.config.config
      • all_param()
      • all_parameters_in_param_type()
      • convert()
      • eval_check()
      • extract_params()
      • find_param_key()
      • generate_from_template()
      • generate_param_dict()
      • get_value()
      • list_check()
      • open_config()
      • str_check()
    • openghg_inversions.config.paths
      • Paths
    • openghg_inversions.config.version
      • code_version()
  • openghg_inversions.hbmcmc
    • openghg_inversions.hbmcmc.components
      • make_offset()
    • openghg_inversions.hbmcmc.hbmcmc
      • fixedbasisMCMC()
      • rerun_output()
    • openghg_inversions.hbmcmc.hbmcmc_output
      • check_and_create_folder()
      • copy_config_file()
      • define_output_filename()
      • ncdf_encoding()
    • openghg_inversions.hbmcmc.hbmcmc_post_process
      • Functions
      • calculate_DIC()
      • check_missing_dates()
      • check_platform()
      • country_emissions()
      • country_emissions_mult()
      • define_stations()
      • extract_hbmcmc_files()
      • open_ds()
      • plot_abs_map()
      • plot_country_timeseries()
      • plot_diff_map()
      • plot_map()
      • plot_map_mult()
      • plot_multi_country_timeseries()
      • plot_scale_map()
      • plot_timeseries()
      • set_clevels()
      • subplot_fmt()
      • unbiasedDivergingCmap()
    • openghg_inversions.hbmcmc.inversion_pymc
      • inferpymc()
      • inferpymc_postprocessouts()
      • lognormal_mu_sigma()
      • parse_prior()
    • openghg_inversions.hbmcmc.inversionsetup
      • create_bc_sensitivity()
      • monthly_bcs()
      • sigma_freq_indicies()
    • openghg_inversions.hbmcmc.post_process_inputs
    • openghg_inversions.hbmcmc.run_hbmcmc
      • define_mcmc_function()
      • extract_mcmc_type()
      • fixed_basis_expected_param()
      • hbmcmc_extract_param()
  • openghg_inversions.inversion_data
    • data_processing_surface_notracer()
    • load_merged_data()
    • openghg_inversions.inversion_data.get_data
      • add_obs_error()
      • convert_to_list()
      • data_processing_surface_notracer()
    • openghg_inversions.inversion_data.getters
      • adjust_flux_start_date()
      • get_flux_data()
      • get_footprint_data()
      • get_footprint_to_match()
      • get_fp_indexer()
      • get_obs_data()
    • openghg_inversions.inversion_data.scenario
      • merged_scenario_data()
    • openghg_inversions.inversion_data.serialise
      • combine_scenario_attrs()
      • fp_all_from_dataset()
      • load_merged_data()
      • make_combined_scenario()
  • openghg_inversions.postprocessing
    • openghg_inversions.postprocessing.countries
      • Countries
      • CountryRegions
      • get_area_grid()
    • openghg_inversions.postprocessing.diagnostics
      • Diagnostic
      • bayes_r2_by_site()
      • bayes_r2_by_site_resample()
      • register_diagnostic()
      • summary()
    • openghg_inversions.postprocessing.inversion_output
      • InversionOutput
      • convert_idata_to_dataset()
      • filter_data_vars_by_prefix()
      • make_inv_out_for_fixed_basis_mcmc()
      • make_inv_out_from_rhime_outputs()
    • openghg_inversions.postprocessing.make_outputs
      • basic_output()
      • convert_suffixes_to_dim()
      • flatten_post_prior()
      • make_concentration_outputs()
      • make_country_outputs()
      • make_flux_outputs()
      • sort_data_vars()
    • openghg_inversions.postprocessing.make_paris_outputs
      • add_variable_attrs()
      • convert_time_to_unix_epoch()
      • get_data_var_attrs()
      • infer_flux_frequency()
      • make_global_attrs()
      • make_paris_flux_outputs_from_rhime()
      • make_paris_outputs()
      • paris_concentration_outputs()
      • paris_flux_output()
      • shift_measurement_time_to_midpoint()
    • openghg_inversions.postprocessing.stats
      • StatsFunction
      • calculate_stats()
      • hdi()
      • mean()
      • median()
      • mode()
      • mode_kde()
      • quantiles()
      • register_stat()
      • stdev()
    • openghg_inversions.postprocessing.utils
      • add_suffix()
      • get_parameters()
      • make_replace_names_dict()
      • rename_by_replacement()
      • update_attrs()
  • openghg_inversions.array_ops
    • Functions
    • align_sparse_lat_lon()
    • get_xr_dummies()
    • sparse_xr_dot()
    • to_dense()
  • openghg_inversions.convert
    • convert_to_hours()
    • mol2g()
    • prefix()
  • openghg_inversions.filters
    • daily_median()
    • daytime()
    • daytime9to5()
    • filtering()
    • list_filters()
    • local_influence()
    • nighttime()
    • noon()
    • pblh()
    • pblh_inlet_diff()
    • pblh_min()
    • register_filter()
    • six_hr_mean()
  • openghg_inversions.model_error
    • percentile_error_method()
    • residual_error_method()
    • setup_min_error()
  • openghg_inversions.utils
    • areagrid()
    • combine_datasets()
    • get_country()
    • get_country_file_path()
    • open_ds()
    • read_netcdfs()