Index A | B | C | D | E | F | G | H | I | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Z A accept_split() (openghg_inversions.basis.algorithms.AllSplitAcceptancePolicies method) (openghg_inversions.basis.algorithms.MaxChildPCAEccentricity method) (openghg_inversions.basis.algorithms.MinChildTargetWeightShare method) (openghg_inversions.basis.algorithms.TargetSplitAcceptancePolicy method) accepts() (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance method) active (openghg_inversions.models.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.StateActivity attribute) (openghg_inversions.models.StateActivity attribute) active_indices (openghg_inversions.models.ResolvedStateActivity property) (openghg_inversions.models.state_activity.ResolvedStateActivity property) active_prior_args() (in module openghg_inversions.models) (in module openghg_inversions.models.state_activity) activity (openghg_inversions.models.components.LinearComponentResult attribute) (openghg_inversions.models.components.StateVectorResult attribute) (openghg_inversions.models.LinearComponentResult attribute) ActivityValue (in module openghg_inversions.models.state_activity) add() (openghg_inversions.models.CoordRegistry method) (openghg_inversions.models.coords.CoordRegistry method) add_additive_sigma_likelihood() (in module openghg_inversions.models.additive_sigma) add_coherent_affine_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_coords() (in module openghg_inversions.models) (in module openghg_inversions.models.coords) add_correlated_lognormal_state() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_correlated_lognormal_state_with_activity() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_fixed_error_likelihood() (in module openghg_inversions.models.fixed_error) add_inferpymc_likelihood_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_linear_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_linked_linear_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_min_error() (in module openghg_inversions.inversion_inputs) add_model_data() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_obs_error() (in module openghg_inversions.inversion_data.get_data) add_offset (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) add_offset_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_pollution_event_likelihood() (in module openghg_inversions.models.pollution_event) add_sigma_component() (in module openghg_inversions.models) (in module openghg_inversions.models.components) add_site_indicator() (in module openghg_inversions.inversion_inputs) add_state_vector() (in module openghg_inversions.models.components) add_suffix() (in module openghg_inversions.postprocessing.utils) add_variable_attrs() (in module openghg_inversions.postprocessing.make_paris_outputs) AdditiveSigmaSettings (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) adjust_flux_start_date() (in module openghg_inversions.inversion_data.getters) aggregation_error (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) aggregation_error_input_names() (in module openghg_inversions.observation_error) aggregation_error_mode (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) AggregationError (class in openghg_inversions.observation_error) align() (openghg_inversions.postprocessing.countries.CountryRegions method) (openghg_inversions.sigma.SigmaAlignment method) align_sparse_lat_lon() (in module openghg_inversions.array_ops) align_to_multi_index_level_values() (in module openghg_inversions.array_ops) all_param() (in module openghg_inversions.config.config) all_parameters_in_param_type() (in module openghg_inversions.config.config) all_region_countries_present_in() (openghg_inversions.postprocessing.countries.CountryRegions method) allocate_nbasis_by_class() (in module openghg_inversions.basis.algorithms) AllSplitAcceptancePolicies (class in openghg_inversions.basis.algorithms) apply() (openghg_inversions.native_covariance.NativeCovarianceAction method) (openghg_inversions.native_covariance.SeparableExponentialCovariance method) (openghg_inversions.source_covariance.IndependentSourceCovariance method) apply_linear_sensitivity() (in module openghg_inversions.models) (in module openghg_inversions.models.components) areagrid() (in module openghg_inversions.utils) arithmetic_covariance (openghg_inversions.correlated_state.CorrelatedLognormalPrior property) (openghg_inversions.models.CorrelatedLognormalPrior property) as_list() (in module openghg_inversions.rhime.params) assemble_rhime_inputs() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) assign_to_matrix() (openghg_inversions.basis.layout.BasisStateMetadata method) attach_coord_registry() (in module openghg_inversions.models) (in module openghg_inversions.models.coords) attrs (openghg_inversions.basis.layout.BasisPartition attribute) auxiliary_coords (openghg_inversions.models.CoordRegistry attribute) (openghg_inversions.models.coords.CoordRegistry attribute) averaging_period (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimeMergedData property) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs property) (openghg_inversions.inversion_data.RhimeMergedData property) (openghg_inversions.inversion_data.RhimePreparedInputs property) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) AxisAlignedWeightedSplitStrategy (class in openghg_inversions.basis.algorithms) AxisParallelSplitStep (class in openghg_inversions.basis.algorithms) B balanced (openghg_inversions.basis.algorithms.AxisParallelSplitStep attribute) (openghg_inversions.basis.algorithms.InertialSplitStep attribute) basic_output() (in module openghg_inversions.postprocessing.make_outputs) basis_artifact_path (openghg_inversions.basis.basis_functions.FluxWeightedBasis property) (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs property) (openghg_inversions.inversion_data.RhimePreparedInputs property) basis_artifact_source (openghg_inversions.basis.basis_functions.FluxWeightedBasis property) (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs property) (openghg_inversions.inversion_data.RhimePreparedInputs property) basis_flat (openghg_inversions.basis.layout.BasisLayoutResult attribute) basis_functions (openghg_inversions.inversion_data.preparation.RhimePreparedInputs attribute) (openghg_inversions.inversion_data.RhimePreparedInputs attribute) (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) basis_functions_from_fp_all_flat_basis() (in module openghg_inversions.basis) (in module openghg_inversions.basis.basis_functions) basis_functions_wrapper() (in module openghg_inversions.basis) basis_matrix (openghg_inversions.basis.operators.BasisOperator property) (openghg_inversions.basis.operators.BucketBasisOperator property) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator property) basis_objects (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) basis_weights_from_fp_all() (in module openghg_inversions.basis) BasisFunctions (in module openghg_inversions.basis) (in module openghg_inversions.basis.basis_functions) BasisLayout (class in openghg_inversions.basis.layout) BasisLayoutResult (class in openghg_inversions.basis.layout) BasisMeta (class in openghg_inversions.basis.operators) BasisOperator (class in openghg_inversions.basis.operators) BasisPartition (class in openghg_inversions.basis.layout) BasisStateMetadata (class in openghg_inversions.basis.layout) bayes_r2_by_site() (in module openghg_inversions.postprocessing.diagnostics) bayes_r2_by_site_resample() (in module openghg_inversions.postprocessing.diagnostics) bc_prior (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) bc_state_activity (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) borrow() (in module openghg_inversions.borrowed) BorrowedDataArray (class in openghg_inversions.borrowed) BorrowedNDArray (class in openghg_inversions.borrowed) BoundaryAlignment (class in openghg_inversions.boundary_sensitivity) bucket_basis_from_weights() (in module openghg_inversions.basis) bucket_basis_function() (in module openghg_inversions.basis) bucketbasisfunction() (in module openghg_inversions.basis) BucketBasisOperator (class in openghg_inversions.basis.operators) build_co2_model() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_model) build_co2_o2_model() (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_o2_model) build_inferpymc_model() (in module openghg_inversions.hbmcmc.inversion_pymc) build_multisector_rhime_model() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.multisector) build_multisector_rhime_model_result() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.multisector) build_parser() (in module openghg_inversions.cli) (in module openghg_inversions.hbmcmc.run_hbmcmc) build_ramsden_model() (in module openghg_inversions.experimental.ramsden2022) (in module openghg_inversions.experimental.ramsden2022.model) build_rhime_basis() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) build_rhime_sensitivities() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) build_standard_rhime_model() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.standard) build_standard_rhime_model_result() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.standard) burn (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) by_site (openghg_inversions.model_error.MinimumError attribute) C calculate_DIC() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) calculate_stats() (in module openghg_inversions.postprocessing.stats) calibrate_basis_prior_stdev() (in module openghg_inversions.basis) (in module openghg_inversions.basis.prior_uncertainty) callable_metadata() (in module openghg_inversions.rhime.builders) cell_weight (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) chains (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) check_and_create_folder() (in module openghg_inversions.hbmcmc.hbmcmc_output) check_missing_dates() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) check_platform() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) checked (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) class_labels (openghg_inversions.native_covariance.SeparableExponentialCovariance property) clean_splits (openghg_inversions.basis.algorithms.AxisParallelSplitStep attribute) clear_datatree_encoding() (in module openghg_inversions.inversion_data.serialise) clear_datatree_time_attrs() (in module openghg_inversions.inversion_data.serialise) co2_model_input_names() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_runner) co2_sensitivity (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) Co2O2PreparedInputs (class in openghg_inversions.rhime.co2) (class in openghg_inversions.rhime.co2.co2_o2_preparation) code_version() (in module openghg_inversions.config.version) coerce_simple_param_types() (in module openghg_inversions.rhime.params) CoherentGaussianReduction (class in openghg_inversions.coherent_reduction) combine_datasets() (in module openghg_inversions.utils) combine_inner_outer_region_classes() (in module openghg_inversions.basis.algorithms) combine_scenario_attrs() (in module openghg_inversions.inversion_data.serialise) ComponentConsolidationPolicy (class in openghg_inversions.basis.algorithms) concat_data_arrays() (in module openghg_inversions.array_ops) concat_gather_data_arrays() (in module openghg_inversions.array_ops) concat_gather_datasets() (in module openghg_inversions.array_ops) concat_gather_datatree() (in module openghg_inversions.array_ops) concentration (openghg_inversions.postprocessing.make_paris_outputs.ParisTemplateFiles attribute) concentration_version (openghg_inversions.postprocessing.make_paris_outputs.ParisTemplateFiles attribute) ConnectedBinaryPartitionStep (class in openghg_inversions.basis.algorithms) ConnectedComponentPartitionStep (class in openghg_inversions.basis.algorithms) ConnectedComponentSplitStrategy (class in openghg_inversions.basis.algorithms) connectivity (openghg_inversions.basis.algorithms.ConnectedBinaryPartitionStep attribute) (openghg_inversions.basis.algorithms.ConnectedComponentPartitionStep attribute) (openghg_inversions.basis.algorithms.ConnectedComponentSplitStrategy attribute) (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) context (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) contrast (openghg_inversions.basis.algorithms.SplitContrastScore attribute) contrast_s_diag (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) contrast_sigma_design (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) contrast_tau (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) contrast_tau_from_multiplier_cv() (in module openghg_inversions.basis.algorithms) ContrastProximityComponentConsolidation (class in openghg_inversions.basis.algorithms) ContrastScoreSplitAcceptance (class in openghg_inversions.basis.algorithms) contribution (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) convert() (in module openghg_inversions.config.config) convert_idata_to_dataset() (in module openghg_inversions.postprocessing.inversion_output) convert_suffixes_to_dim() (in module openghg_inversions.postprocessing.make_outputs) convert_time_to_unix_epoch() (in module openghg_inversions.postprocessing.make_paris_outputs) convert_to_hours() (in module openghg_inversions.convert) convert_to_list() (in module openghg_inversions.inversion_data.get_data) coordinates() (openghg_inversions.basis.algorithms.LatLonGridGeometry method) (openghg_inversions.basis.algorithms.SplitGeometry method) CoordRegistry (class in openghg_inversions.models) (class in openghg_inversions.models.coords) copy() (openghg_inversions.borrowed.BorrowedDataArray method) (openghg_inversions.borrowed.BorrowedNDArray method) copy_config_file() (in module openghg_inversions.hbmcmc.hbmcmc_output) copy_flux_nonfinite_attrs() (in module openghg_inversions.flux_sanitization) CorrelatedLognormalPrior (class in openghg_inversions.correlated_state) (class in openghg_inversions.models) CorrelatedStateResult (class in openghg_inversions.models) (class in openghg_inversions.models.components) correlation_length (openghg_inversions.native_covariance.SeparableExponentialCovariance property) count (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) Countries (class in openghg_inversions.postprocessing.countries) country_emissions() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) country_emissions_mult() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) country_file (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) CountryRegions (class in openghg_inversions.postprocessing.countries) covariance (openghg_inversions.observation_error.AggregationError attribute) covariance_dim (openghg_inversions.correlated_state.CorrelatedLognormalPrior attribute) (openghg_inversions.models.CorrelatedLognormalPrior attribute) create_bc_sensitivity() (in module openghg_inversions.hbmcmc.inversionsetup) D daily_median() (in module openghg_inversions.filters) data (openghg_inversions.borrowed.BorrowedDataArray property) (openghg_inversions.boundary_sensitivity.BoundaryAlignment attribute) (openghg_inversions.models.components.LinearComponentResult attribute) (openghg_inversions.models.LinearComponentResult attribute) data_args (openghg_inversions.rhime.params.RhimeRunnerSetup attribute) data_processing_surface_notracer() (in module openghg_inversions.inversion_data) (in module openghg_inversions.inversion_data.get_data) dataset (openghg_inversions.basis.layout.BasisStateMetadata attribute) dataset_to_bc_data() (in module openghg_inversions.inversion_data.serialise) dataset_to_flux_data() (in module openghg_inversions.inversion_data.serialise) datatree_compression_encoding() (in module openghg_inversions.inversion_data.serialise) datatree_ncdf_encoding() (in module openghg_inversions.utils) datatree_to_flux_dict() (in module openghg_inversions.inversion_data.serialise) datatree_to_fp_all() (in module openghg_inversions.inversion_data.serialise) daytime() (in module openghg_inversions.filters) daytime9to5() (in module openghg_inversions.filters) declares_zero_fill() (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata method) decode_cf_multiindexes() (in module openghg_inversions.serialization) decode_datatree() (openghg_inversions.basis.operators.BasisOperator class method) define_output_filename() (in module openghg_inversions.hbmcmc.hbmcmc_output) define_stations() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) delta_dfs (openghg_inversions.basis.algorithms.SplitContrastScore attribute) delta_eig (openghg_inversions.basis.algorithms.SplitContrastScore attribute) detect_zero_sensitivity() (in module openghg_inversions.models) (in module openghg_inversions.models.state_activity) Diagnostic (class in openghg_inversions.postprocessing.diagnostics) diagnostics (openghg_inversions.basis.algorithms.ConnectedComponentSplitStrategy attribute) (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) diagonal_variance (openghg_inversions.observation_error.AggregationError attribute) domain (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) draws (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) drop_singleton_time() (in module openghg_inversions.basis.operators) E earth_radius_m (openghg_inversions.basis.algorithms.LatLonGridGeometry attribute) effective_observation_operator (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) encode_cf_multiindexes() (in module openghg_inversions.serialization) encode_multiindexes_for_storage() (in module openghg_inversions.serialization) end_date (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) end_time (openghg_inversions.postprocessing.inversion_output.InversionOutput property) eval_check() (in module openghg_inversions.config.config) evaluate_co2_o2_prior_forward_mean() (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_o2_model) extend_inferencedata_predictive() (in module openghg_inversions.hbmcmc.inversion_pymc) extract_hbmcmc_files() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) extract_mcmc_type() (in module openghg_inversions.hbmcmc.run_hbmcmc) extract_params() (in module openghg_inversions.config.config) F factor (openghg_inversions.observation_error.AggregationError attribute) fill() (openghg_inversions.borrowed.BorrowedNDArray method) fill_value (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) filter_data_vars_by_prefix() (in module openghg_inversions.postprocessing.inversion_output) filter_rhime_observations() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) filtering() (in module openghg_inversions.filters) find_param_key() (in module openghg_inversions.config.config) fixed_basis_expected_param() (in module openghg_inversions.hbmcmc.run_hbmcmc) fixed_groups (openghg_inversions.models.state_activity.StateActivity attribute) (openghg_inversions.models.StateActivity attribute) fixed_indices (openghg_inversions.models.ResolvedStateActivity property) (openghg_inversions.models.state_activity.ResolvedStateActivity property) fixed_outer_regions_basis() (in module openghg_inversions.basis) fixed_prior_contribution (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) fixed_ratio (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) fixed_value (openghg_inversions.models.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.StateActivity attribute) (openghg_inversions.models.StateActivity attribute) fixedbasis_params_to_rhime() (in module openghg_inversions.hbmcmc.run_hbmcmc) fixedbasisMCMC() (in module openghg_inversions.hbmcmc.hbmcmc) FixedBasisPreparedData (class in openghg_inversions.hbmcmc.preparation) FixedErrorSettings (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) FixedValue (in module openghg_inversions.models.state_activity) flat_basis() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) flat_basis_for_output() (in module openghg_inversions.postprocessing.make_outputs) flatten_post_prior() (in module openghg_inversions.postprocessing.make_outputs) flux (openghg_inversions.basis.basis_functions.FluxWeightedBasis attribute) (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.postprocessing.make_paris_outputs.ParisTemplateFiles attribute) flux_dict_to_datatree() (in module openghg_inversions.inversion_data.serialise) flux_from_fp_all() (in module openghg_inversions.basis.basis_functions) flux_source (openghg_inversions.postprocessing.make_outputs.OutputSector attribute) (openghg_inversions.rhime.SectorSpec attribute) (openghg_inversions.rhime.specs.SectorSpec attribute) flux_version (openghg_inversions.postprocessing.make_paris_outputs.ParisTemplateFiles attribute) FluxNonFiniteMetadata (class in openghg_inversions.flux_sanitization) FluxWeightedBasis (class in openghg_inversions.basis.basis_functions) for_source() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) force_align() (in module openghg_inversions.array_ops) fp_all (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimeMergedData attribute) (openghg_inversions.inversion_data.RhimeMergedData attribute) fp_all_from_dataset() (in module openghg_inversions.inversion_data.serialise) fp_all_to_datatree() (in module openghg_inversions.inversion_data.serialise) fp_data (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) fraction (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) from_attrs() (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata class method) from_dataarray() (openghg_inversions.basis.algorithms.LatLonGridGeometry class method) from_dataset() (openghg_inversions.basis.layout.BasisStateMetadata class method) (openghg_inversions.correlated_state.CorrelatedLognormalPrior class method) (openghg_inversions.models.CorrelatedLognormalPrior class method) (openghg_inversions.native_covariance.SeparableExponentialCovariance class method) (openghg_inversions.source_covariance.IndependentSourceCovariance class method) from_datatree() (openghg_inversions.basis.basis_functions.FluxWeightedBasis class method) (openghg_inversions.basis.operators.BasisOperator class method) (openghg_inversions.basis.operators.BucketBasisOperator class method) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator class method) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs class method) (openghg_inversions.inversion_data.RhimePreparedInputs class method) (openghg_inversions.postprocessing.inversion_output.InversionOutput class method) from_file() (openghg_inversions.postprocessing.countries.Countries class method) (openghg_inversions.postprocessing.countries.CountryRegions class method) from_flat_basis() (openghg_inversions.basis.basis_functions.FluxWeightedBasis class method) from_frequency() (openghg_inversions.sigma.SigmaAlignment class method) from_indices() (openghg_inversions.sigma.SigmaAlignment class method) from_json() (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata class method) from_legacy_inputs() (openghg_inversions.inversion_data.preparation.RhimePreparedInputs class method) (openghg_inversions.inversion_data.RhimePreparedInputs class method) from_matrix() (openghg_inversions.basis.layout.BasisStateMetadata class method) from_model_data() (openghg_inversions.sigma.SigmaAlignment class method) from_multi_source_flat_basis() (openghg_inversions.basis.basis_functions.FluxWeightedBasis class method) from_observations() (openghg_inversions.sigma.SigmaAlignment class method) func (openghg_inversions.postprocessing.diagnostics.Diagnostic attribute) (openghg_inversions.postprocessing.stats.StatsFunction attribute) G generate_from_template() (in module openghg_inversions.config.config) generate_param_dict() (in module openghg_inversions.config.config) geometry (openghg_inversions.basis.algorithms.AxisParallelSplitStep attribute) (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.InertialSplitStep attribute) (openghg_inversions.basis.algorithms.MaxChildPCAEccentricity attribute) get_area_grid() (in module openghg_inversions.postprocessing.countries) get_basis_operator_class() (in module openghg_inversions.basis.operators) get_coord_registry() (in module openghg_inversions.models) (in module openghg_inversions.models.coords) get_country() (in module openghg_inversions.utils) get_country_file_path() (in module openghg_inversions.utils) get_country_trace() (openghg_inversions.postprocessing.countries.Countries method) get_data_var_attrs() (in module openghg_inversions.postprocessing.make_paris_outputs) get_data_var_dtypes() (in module openghg_inversions.postprocessing.make_paris_outputs) get_flux_data() (in module openghg_inversions.inversion_data.getters) get_footprint_data() (in module openghg_inversions.inversion_data.getters) get_footprint_to_match() (in module openghg_inversions.inversion_data.getters) get_fp_indexer() (in module openghg_inversions.inversion_data.getters) get_model_latent() (in module openghg_inversions.models.components) get_obs_data() (in module openghg_inversions.inversion_data.getters) get_parameters() (in module openghg_inversions.postprocessing.utils) get_value() (in module openghg_inversions.config.config) get_x_to_country_mat() (openghg_inversions.postprocessing.countries.Countries method) get_xr_dummies() (in module openghg_inversions.array_ops) greedy_partitioning() (in module openghg_inversions.basis.algorithms) GreedySplitStrategy (class in openghg_inversions.basis.algorithms) grid_dims (openghg_inversions.basis.operators.BasisMeta attribute) group (openghg_inversions.basis.layout.BasisPartition attribute) group_coord (openghg_inversions.models.state_activity.StateActivity attribute) (openghg_inversions.models.StateActivity attribute) H hbmcmc_extract_param() (in module openghg_inversions.hbmcmc.run_hbmcmc) hdi() (in module openghg_inversions.postprocessing.stats) I idata (openghg_inversions.experimental.ramsden2022.model.RamsdenResult attribute) (openghg_inversions.experimental.ramsden2022.RamsdenResult attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) inactive_component_policy (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) IndependentSourceCovariance (class in openghg_inversions.source_covariance) InertialSplitStep (class in openghg_inversions.basis.algorithms) infer_flux_frequency() (in module openghg_inversions.postprocessing.make_paris_outputs) inferencedata_from_datatree() (in module openghg_inversions.serialization) inferencedata_to_datatree() (in module openghg_inversions.serialization) inferpymc() (in module openghg_inversions.hbmcmc.inversion_pymc) inferpymc_postprocessouts() (in module openghg_inversions.hbmcmc.inversion_pymc) input_dataset() (openghg_inversions.postprocessing.inversion_output.InversionOutput method) interpolate() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) (openghg_inversions.basis.operators.BasisOperator method) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator method) intersect_region_class_layers() (in module openghg_inversions.basis.algorithms) inv_inputs (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs attribute) (openghg_inversions.inversion_data.RhimePreparedInputs attribute) (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) inv_out (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) InversionOutput (class in openghg_inversions.postprocessing.inversion_output) InvertibleNativeCovarianceAction (class in openghg_inversions.native_covariance) is_column (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) is_missing_required_value() (in module openghg_inversions.rhime.params) is_multisector (openghg_inversions.postprocessing.inversion_output.InversionOutput property) item() (openghg_inversions.borrowed.BorrowedDataArray method) iter_multi_index_level_slices() (in module openghg_inversions.array_ops) K kind (openghg_inversions.basis.operators.BasisOperator attribute) (openghg_inversions.basis.operators.BucketBasisOperator attribute) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator attribute) L labels (openghg_inversions.basis.layout.BasisPartition attribute) lambda_value (openghg_inversions.basis.algorithms.SplitContrastScore attribute) latent (openghg_inversions.models.components.CorrelatedStateResult attribute) (openghg_inversions.models.components.LinearComponentResult attribute) (openghg_inversions.models.components.StateVectorResult attribute) (openghg_inversions.models.CorrelatedStateResult attribute) (openghg_inversions.models.LinearComponentResult attribute) latent_cholesky (openghg_inversions.correlated_state.CorrelatedLognormalPrior property) (openghg_inversions.models.CorrelatedLognormalPrior property) latent_covariance (openghg_inversions.correlated_state.CorrelatedLognormalPrior property) (openghg_inversions.models.CorrelatedLognormalPrior property) latent_mean (openghg_inversions.correlated_state.CorrelatedLognormalPrior property) (openghg_inversions.models.CorrelatedLognormalPrior property) latitude (openghg_inversions.native_covariance.SeparableExponentialCovariance property) latitude_correlation_length (openghg_inversions.native_covariance.SeparableExponentialCovariance property) latitude_correlation_length_explicit (openghg_inversions.native_covariance.SeparableExponentialCovariance property) latitudes (openghg_inversions.basis.algorithms.LatLonGridGeometry attribute) LatLonGridGeometry (class in openghg_inversions.basis.algorithms) likelihood (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) LinearComponentResult (class in openghg_inversions.models) (class in openghg_inversions.models.components) list_check() (in module openghg_inversions.config.config) list_filters() (in module openghg_inversions.filters) load() (openghg_inversions.basis.basis_functions.FluxWeightedBasis class method) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs class method) (openghg_inversions.inversion_data.RhimePreparedInputs class method) (openghg_inversions.postprocessing.inversion_output.InversionOutput class method) load_basis_functions() (in module openghg_inversions.basis) load_country_region_classes() (in module openghg_inversions.basis) load_inferencedata() (in module openghg_inversions.serialization) load_intem_outer_regions() (in module openghg_inversions.basis) load_merged_data() (in module openghg_inversions.inversion_data) (in module openghg_inversions.inversion_data.serialise) local_influence() (in module openghg_inversions.filters) lognormal_mu_sigma() (in module openghg_inversions.models.priors) longitude (openghg_inversions.native_covariance.SeparableExponentialCovariance property) longitude_correlation_length (openghg_inversions.native_covariance.SeparableExponentialCovariance property) longitude_correlation_length_explicit (openghg_inversions.native_covariance.SeparableExponentialCovariance property) longitudes (openghg_inversions.basis.algorithms.LatLonGridGeometry attribute) M main() (in module openghg_inversions.cli) (in module openghg_inversions.hbmcmc.run_hbmcmc) make_basis_functions() (in module openghg_inversions.basis) make_combined_scenario() (in module openghg_inversions.inversion_data.serialise) make_concentration_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_country_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_flux_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_freq_indicator() (in module openghg_inversions.inversion_inputs) make_global_attrs() (in module openghg_inversions.postprocessing.make_paris_outputs) make_inv_inputs() (in module openghg_inversions.inversion_inputs) make_legacy_hbmcmc_output() (in module openghg_inversions.postprocessing.legacy_outputs) make_multisector_country_trace_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_multisector_flux_trace_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_multisector_rhime_outputs() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.outputs) make_multisector_rhime_result() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.multisector) make_offset() (in module openghg_inversions.hbmcmc.components) make_output_spec() (in module openghg_inversions.rhime.specs) make_paris_outputs() (in module openghg_inversions.postprocessing.make_paris_outputs) make_replace_names_dict() (in module openghg_inversions.postprocessing.utils) make_rhime_runner_setup() (in module openghg_inversions.rhime.params) make_sector_flux_outputs() (in module openghg_inversions.postprocessing.make_outputs) make_sigma_freq() (in module openghg_inversions.inversion_inputs) make_site_indicator() (in module openghg_inversions.inversion_inputs) make_site_names() (in module openghg_inversions.inversion_inputs) make_standard_rhime_outputs() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.outputs) make_standard_rhime_result() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.standard) marginal_variance (openghg_inversions.observation_error.AggregationError attribute) materialize_pymc_inputs() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.materialization) max_child_pca_eccentricity (openghg_inversions.basis.algorithms.MaxChildPCAEccentricity attribute) max_iter (openghg_inversions.basis.algorithms.AxisAlignedWeightedSplitStrategy attribute) max_merge_delta_eig (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) max_merge_distance_km (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) max_merge_lambda (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) MaxChildPCAEccentricity (class in openghg_inversions.basis.algorithms) mean (openghg_inversions.correlated_state.CorrelatedLognormalPrior property) (openghg_inversions.models.CorrelatedLognormalPrior property) mean() (in module openghg_inversions.postprocessing.stats) median() (in module openghg_inversions.postprocessing.stats) merge() (openghg_inversions.postprocessing.countries.Countries method) merge_paris_outputs() (in module openghg_inversions.postprocessing.merge_paris_outputs) merged_scenario_data() (in module openghg_inversions.inversion_data.scenario) meta (openghg_inversions.basis.operators.BasisOperator property) (openghg_inversions.basis.operators.BucketBasisOperator property) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator property) metadata (openghg_inversions.basis.basis_functions.FluxWeightedBasis attribute) (openghg_inversions.rhime.builders.RhimeModelBuildResult attribute) (openghg_inversions.rhime.RhimeModelBuildResult attribute) method (openghg_inversions.model_error.MinimumError attribute) min_child_target_weight_share (openghg_inversions.basis.algorithms.MaxChildPCAEccentricity attribute) (openghg_inversions.basis.algorithms.MinChildTargetWeightShare attribute) min_child_weight_share (openghg_inversions.basis.algorithms.MinChildWeightShare attribute) min_contrast_delta_eig (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) min_contrast_lambda (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) min_regions (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) MinChildTargetWeightShare (class in openghg_inversions.basis.algorithms) MinChildWeightShare (class in openghg_inversions.basis.algorithms) MinimumError (class in openghg_inversions.model_error) mode (openghg_inversions.observation_error.AggregationError attribute) mode() (in module openghg_inversions.postprocessing.stats) mode_kde() (in module openghg_inversions.postprocessing.stats) model (openghg_inversions.experimental.ramsden2022.model.RamsdenResult attribute) (openghg_inversions.experimental.ramsden2022.RamsdenResult attribute) (openghg_inversions.rhime.builders.RhimeModelBuildResult attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeModelBuildResult attribute) (openghg_inversions.rhime.RhimeResult attribute) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) model_build_result (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) model_data() (openghg_inversions.postprocessing.inversion_output.InversionOutput method) model_error_output() (in module openghg_inversions.postprocessing.make_outputs) model_metadata (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) model_spec (openghg_inversions.experimental.ramsden2022.model.RamsdenResult attribute) (openghg_inversions.experimental.ramsden2022.RamsdenResult attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) module openghg_inversions openghg_inversions.array_ops openghg_inversions.basis openghg_inversions.basis.algorithms openghg_inversions.basis.basis_functions openghg_inversions.basis.covariance_products openghg_inversions.basis.layout openghg_inversions.basis.operators openghg_inversions.basis.prior_uncertainty openghg_inversions.borrowed openghg_inversions.boundary_sensitivity openghg_inversions.cli openghg_inversions.coherent_reduction openghg_inversions.config openghg_inversions.config.config openghg_inversions.config.paths openghg_inversions.config.version openghg_inversions.convert openghg_inversions.correlated_state openghg_inversions.experimental openghg_inversions.experimental.ramsden2022 openghg_inversions.experimental.ramsden2022.model openghg_inversions.filters openghg_inversions.flux_sanitization openghg_inversions.hbmcmc openghg_inversions.hbmcmc.components openghg_inversions.hbmcmc.hbmcmc openghg_inversions.hbmcmc.hbmcmc_output openghg_inversions.hbmcmc.hbmcmc_post_process openghg_inversions.hbmcmc.inversion_pymc openghg_inversions.hbmcmc.inversionsetup openghg_inversions.hbmcmc.post_process_inputs openghg_inversions.hbmcmc.preparation openghg_inversions.hbmcmc.run_hbmcmc openghg_inversions.inversion_data openghg_inversions.inversion_data.get_data openghg_inversions.inversion_data.getters openghg_inversions.inversion_data.preparation openghg_inversions.inversion_data.scenario openghg_inversions.inversion_data.serialise openghg_inversions.inversion_data.xarray_adapter openghg_inversions.inversion_inputs openghg_inversions.model_error openghg_inversions.models openghg_inversions.models.additive_sigma openghg_inversions.models.components openghg_inversions.models.coords openghg_inversions.models.fixed_error openghg_inversions.models.pollution_event openghg_inversions.models.priors openghg_inversions.models.state_activity openghg_inversions.native_covariance openghg_inversions.observation_error openghg_inversions.postprocessing openghg_inversions.postprocessing.countries openghg_inversions.postprocessing.diagnostics openghg_inversions.postprocessing.inversion_output openghg_inversions.postprocessing.legacy_outputs openghg_inversions.postprocessing.make_outputs openghg_inversions.postprocessing.make_paris_outputs openghg_inversions.postprocessing.merge_paris_outputs openghg_inversions.postprocessing.sigma openghg_inversions.postprocessing.stats openghg_inversions.postprocessing.utils openghg_inversions.rhime openghg_inversions.rhime.builders openghg_inversions.rhime.co2 openghg_inversions.rhime.co2.co2_model openghg_inversions.rhime.co2.co2_o2_model openghg_inversions.rhime.co2.co2_o2_preparation openghg_inversions.rhime.co2.co2_o2_runner openghg_inversions.rhime.co2.co2_runner openghg_inversions.rhime.materialization openghg_inversions.rhime.multisector openghg_inversions.rhime.outputs openghg_inversions.rhime.params openghg_inversions.rhime.preparation openghg_inversions.rhime.prepared openghg_inversions.rhime.sampling openghg_inversions.rhime.specs openghg_inversions.rhime.standard openghg_inversions.serialization openghg_inversions.sigma openghg_inversions.source_covariance openghg_inversions.utils mol2g() (in module openghg_inversions.convert) monthly_bcs() (in module openghg_inversions.hbmcmc.inversionsetup) mu_a (openghg_inversions.basis.algorithms.SplitContrastScore attribute) mu_b (openghg_inversions.basis.algorithms.SplitContrastScore attribute) multisector (openghg_inversions.rhime.builders.RhimeModelBuilderContext attribute) (openghg_inversions.rhime.RhimeModelBuilderContext attribute) multisector_model_input_names() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.multisector) MultiSourceBucketBasisOperator (class in openghg_inversions.basis.operators) N n_active (openghg_inversions.models.ResolvedStateActivity property) (openghg_inversions.models.state_activity.ResolvedStateActivity property) n_state (openghg_inversions.models.ResolvedStateActivity property) (openghg_inversions.models.state_activity.ResolvedStateActivity property) name (openghg_inversions.basis.covariance_products.PreserveBucketProlongation attribute) (openghg_inversions.basis.layout.BasisPartition attribute) (openghg_inversions.basis.PreserveBucketProlongation attribute) (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) (openghg_inversions.postprocessing.make_outputs.OutputSector attribute) (openghg_inversions.postprocessing.stats.StatsFunction attribute) (openghg_inversions.rhime.SectorSpec attribute) (openghg_inversions.rhime.specs.SectorSpec attribute) native_dims (openghg_inversions.native_covariance.NativeCovarianceAction property) (openghg_inversions.native_covariance.SeparableExponentialCovariance property) (openghg_inversions.source_covariance.IndependentSourceCovariance property) native_observation_covariance (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) native_observation_mean (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) native_prolongation() (openghg_inversions.basis.operators.BasisOperator method) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator method) NativeCovarianceAction (class in openghg_inversions.native_covariance) NativeCovarianceProducts (class in openghg_inversions.basis) (class in openghg_inversions.basis.covariance_products) ncdf_encoding() (in module openghg_inversions.utils) nighttime() (in module openghg_inversions.filters) NonFiniteFluxWarning noon() (in module openghg_inversions.filters) normalise_declared_multiindex() (in module openghg_inversions.serialization) normalise_min_error_options() (in module openghg_inversions.model_error) normalise_optional_mapping() (in module openghg_inversions.rhime.params) normalise_output_format_alias() (in module openghg_inversions.rhime.params) normalise_param_aliases() (in module openghg_inversions.rhime.params) normalise_rhime_params() (in module openghg_inversions.rhime.params) normalise_sector_priors() (in module openghg_inversions.rhime.params) normalise_sector_sources() (in module openghg_inversions.rhime.params) normalize_spatial_grid() (in module openghg_inversions.basis.algorithms) nperiod (openghg_inversions.sigma.SigmaAlignment property) nsite (openghg_inversions.sigma.SigmaAlignment property) nuts_sampler (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) O o2_co2_flux_ratio (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) o2_co2_flux_ratio_unavailable_reason (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) o2_sensitivity (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) observation_and_error_outputs() (in module openghg_inversions.postprocessing.make_outputs) observation_covariance_view (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) observation_inputs_for_outputs() (in module openghg_inversions.postprocessing.make_outputs) observation_intercept (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) observation_state_cross_covariance (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) observation_units (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) observations (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) offset_args (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) offset_prior (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) on_state_dim() (openghg_inversions.basis.layout.BasisStateMetadata method) open_config() (in module openghg_inversions.config.config) open_datatree_loaded() (in module openghg_inversions.serialization) open_ds() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) (in module openghg_inversions.utils) openghg_data_to_dataset() (in module openghg_inversions.inversion_data.serialise) openghg_inversions module openghg_inversions.array_ops module openghg_inversions.basis module openghg_inversions.basis.algorithms module openghg_inversions.basis.basis_functions module openghg_inversions.basis.covariance_products module openghg_inversions.basis.layout module openghg_inversions.basis.operators module openghg_inversions.basis.prior_uncertainty module openghg_inversions.borrowed module openghg_inversions.boundary_sensitivity module openghg_inversions.cli module openghg_inversions.coherent_reduction module openghg_inversions.config module openghg_inversions.config.config module openghg_inversions.config.paths module openghg_inversions.config.version module openghg_inversions.convert module openghg_inversions.correlated_state module openghg_inversions.experimental module openghg_inversions.experimental.ramsden2022 module openghg_inversions.experimental.ramsden2022.model module openghg_inversions.filters module openghg_inversions.flux_sanitization module openghg_inversions.hbmcmc module openghg_inversions.hbmcmc.components module openghg_inversions.hbmcmc.hbmcmc module openghg_inversions.hbmcmc.hbmcmc_output module openghg_inversions.hbmcmc.hbmcmc_post_process module openghg_inversions.hbmcmc.inversion_pymc module openghg_inversions.hbmcmc.inversionsetup module openghg_inversions.hbmcmc.post_process_inputs module openghg_inversions.hbmcmc.preparation module openghg_inversions.hbmcmc.run_hbmcmc module openghg_inversions.inversion_data module openghg_inversions.inversion_data.get_data module openghg_inversions.inversion_data.getters module openghg_inversions.inversion_data.preparation module openghg_inversions.inversion_data.scenario module openghg_inversions.inversion_data.serialise module openghg_inversions.inversion_data.xarray_adapter module openghg_inversions.inversion_inputs module openghg_inversions.model_error module openghg_inversions.models module openghg_inversions.models.additive_sigma module openghg_inversions.models.components module openghg_inversions.models.coords module openghg_inversions.models.fixed_error module openghg_inversions.models.pollution_event module openghg_inversions.models.priors module openghg_inversions.models.state_activity module openghg_inversions.native_covariance module openghg_inversions.observation_error module openghg_inversions.postprocessing module openghg_inversions.postprocessing.countries module openghg_inversions.postprocessing.diagnostics module openghg_inversions.postprocessing.inversion_output module openghg_inversions.postprocessing.legacy_outputs module openghg_inversions.postprocessing.make_outputs module openghg_inversions.postprocessing.make_paris_outputs module openghg_inversions.postprocessing.merge_paris_outputs module openghg_inversions.postprocessing.sigma module openghg_inversions.postprocessing.stats module openghg_inversions.postprocessing.utils module openghg_inversions.rhime module openghg_inversions.rhime.builders module openghg_inversions.rhime.co2 module openghg_inversions.rhime.co2.co2_model module openghg_inversions.rhime.co2.co2_o2_model module openghg_inversions.rhime.co2.co2_o2_preparation module openghg_inversions.rhime.co2.co2_o2_runner module openghg_inversions.rhime.co2.co2_runner module openghg_inversions.rhime.materialization module openghg_inversions.rhime.multisector module openghg_inversions.rhime.outputs module openghg_inversions.rhime.params module openghg_inversions.rhime.preparation module openghg_inversions.rhime.prepared module openghg_inversions.rhime.sampling module openghg_inversions.rhime.specs module openghg_inversions.rhime.standard module openghg_inversions.serialization module openghg_inversions.sigma module openghg_inversions.source_covariance module openghg_inversions.utils module openghginv (openghg_inversions.config.paths.Paths attribute) operator (openghg_inversions.basis.basis_functions.FluxWeightedBasis attribute) operator_for_source() (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator method) original_coords (openghg_inversions.models.CoordRegistry attribute) (openghg_inversions.models.coords.CoordRegistry attribute) output (openghg_inversions.models.components.LinearComponentResult attribute) (openghg_inversions.models.LinearComponentResult attribute) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) output_dim (openghg_inversions.models.PreparedLinearSensitivity attribute) (openghg_inversions.models.state_activity.PreparedLinearSensitivity attribute) output_filename_convention (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) output_format (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) output_metadata (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) output_name (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) output_path (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) output_spec (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) outputs (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.RhimeResult attribute) OutputSector (class in openghg_inversions.postprocessing.make_outputs) P paired_abs_response_weights() (in module openghg_inversions.basis) params (openghg_inversions.postprocessing.diagnostics.Diagnostic attribute) (openghg_inversions.postprocessing.stats.StatsFunction attribute) params_from_config() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.params) paris_concentration_outputs() (in module openghg_inversions.postprocessing.make_paris_outputs) paris_concentration_outputs_latest() (in module openghg_inversions.postprocessing.make_paris_outputs) paris_flux_output() (in module openghg_inversions.postprocessing.make_paris_outputs) paris_flux_output_latest() (in module openghg_inversions.postprocessing.make_paris_outputs) paris_postprocessing_kwargs (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) paris_template_files() (in module openghg_inversions.postprocessing.make_paris_outputs) ParisTemplateFiles (class in openghg_inversions.postprocessing.make_paris_outputs) parse_prior() (in module openghg_inversions.models) (in module openghg_inversions.models.priors) partition() (openghg_inversions.borrowed.BorrowedNDArray method) partitions (openghg_inversions.basis.layout.BasisLayout attribute) PartitionStep (class in openghg_inversions.basis.algorithms) Paths (class in openghg_inversions.config.paths) pblh() (in module openghg_inversions.filters) pblh_inlet_diff() (in module openghg_inversions.filters) pblh_min() (in module openghg_inversions.filters) percentile_error_method() (in module openghg_inversions.model_error) period_index (openghg_inversions.sigma.SigmaAlignment attribute) period_midpoint (openghg_inversions.postprocessing.inversion_output.InversionOutput property) platform (openghg_inversions.inversion_data.preparation.RhimeMergedData property) (openghg_inversions.inversion_data.RhimeMergedData property) plot() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) plot_abs_map() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_country_timeseries() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_diff_map() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_map() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_map_mult() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_multi_country_timeseries() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_scale_map() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) plot_timeseries() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) policies (openghg_inversions.basis.algorithms.AllSplitAcceptancePolicies attribute) policy (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) pollution_events_from_obs (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) PollutionEventSettings (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) posterior_predictive_kwargs (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) power (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) prefix() (in module openghg_inversions.convert) prepare() (openghg_inversions.boundary_sensitivity.BoundaryAlignment class method) (openghg_inversions.model_error.MinimumError class method) prepare_co2_o2_inputs() (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_o2_preparation) prepare_fixedbasis_inversion_data() (in module openghg_inversions.hbmcmc.preparation) prepare_linear_sensitivity() (in module openghg_inversions.models) (in module openghg_inversions.models.state_activity) prepare_rhime_inputs() (in module openghg_inversions.inversion_data) (in module openghg_inversions.inversion_data.preparation) prepare_rhime_inputs_from_xarray() (in module openghg_inversions.inversion_data) (in module openghg_inversions.inversion_data.xarray_adapter) prepared_inputs (openghg_inversions.experimental.ramsden2022.model.RamsdenResult attribute) (openghg_inversions.experimental.ramsden2022.RamsdenResult attribute) (openghg_inversions.rhime.builders.RhimeModelBuilderContext attribute) (openghg_inversions.rhime.RhimeModelBuilderContext attribute) PreparedLinearSensitivity (class in openghg_inversions.models) (class in openghg_inversions.models.state_activity) PreserveBucketProlongation (class in openghg_inversions.basis) (class in openghg_inversions.basis.covariance_products) primary (openghg_inversions.experimental.ramsden2022.model.RamsdenModelSpec attribute) (openghg_inversions.experimental.ramsden2022.model.RamsdenPreparedInputs attribute) (openghg_inversions.experimental.ramsden2022.RamsdenModelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenPreparedInputs attribute) primary_basis_functions (openghg_inversions.experimental.ramsden2022.model.RamsdenPreparedInputs attribute) (openghg_inversions.experimental.ramsden2022.RamsdenPreparedInputs attribute) primary_flux_source (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) prior (openghg_inversions.models.components.CorrelatedStateResult attribute) (openghg_inversions.models.CorrelatedStateResult attribute) progressbar (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) project_basis_prior_stdev() (in module openghg_inversions.basis) (in module openghg_inversions.basis.prior_uncertainty) project_native_covariance() (in module openghg_inversions.basis) (in module openghg_inversions.basis.covariance_products) projection() (openghg_inversions.basis.covariance_products.PreserveBucketProlongation method) (openghg_inversions.basis.covariance_products.RetainedProjectionStrategy method) (openghg_inversions.basis.PreserveBucketProlongation method) (openghg_inversions.basis.RetainedProjectionStrategy method) projection_strategy (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) prolongation (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) provenance (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) put() (openghg_inversions.borrowed.BorrowedNDArray method) pymc_coords (openghg_inversions.models.CoordRegistry attribute) (openghg_inversions.models.coords.CoordRegistry attribute) Q quadtree_algorithm() (in module openghg_inversions.basis.algorithms) quadtree_basis_from_weights() (in module openghg_inversions.basis) quadtree_basis_function() (in module openghg_inversions.basis) quadtreebasisfunction() (in module openghg_inversions.basis) quantiles() (in module openghg_inversions.postprocessing.stats) R RamsdenChannelSpec (class in openghg_inversions.experimental.ramsden2022) (class in openghg_inversions.experimental.ramsden2022.model) RamsdenModelSpec (class in openghg_inversions.experimental.ramsden2022) (class in openghg_inversions.experimental.ramsden2022.model) RamsdenPreparedInputs (class in openghg_inversions.experimental.ramsden2022) (class in openghg_inversions.experimental.ramsden2022.model) RamsdenResult (class in openghg_inversions.experimental.ramsden2022) (class in openghg_inversions.experimental.ramsden2022.model) RamsdenSectorSpec (class in openghg_inversions.experimental.ramsden2022) (class in openghg_inversions.experimental.ramsden2022.model) ratio_prior (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) ratio_resolution (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) read_netcdfs() (in module openghg_inversions.utils) reconstruct_sigma_aligned() (in module openghg_inversions.postprocessing.sigma) reduce_native_gaussian() (in module openghg_inversions.coherent_reduction) reference_ratio (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) region_class_mask() (in module openghg_inversions.basis.algorithms) region_constrained_basis() (in module openghg_inversions.basis.algorithms) region_constrained_basis_from_weights() (in module openghg_inversions.basis) region_constrained_basis_function() (in module openghg_inversions.basis) region_constrained_fixed_outer_basis_from_weights() (in module openghg_inversions.basis) region_countries_missing_from() (openghg_inversions.postprocessing.countries.CountryRegions method) region_names (openghg_inversions.postprocessing.countries.CountryRegions property) register_basis_operator() (in module openghg_inversions.basis.operators) register_diagnostic() (in module openghg_inversions.postprocessing.diagnostics) register_filter() (in module openghg_inversions.filters) register_stat() (in module openghg_inversions.postprocessing.stats) registered_model() (in module openghg_inversions.models) (in module openghg_inversions.models.coords) removed (openghg_inversions.models.PreparedLinearSensitivity attribute) (openghg_inversions.models.state_activity.PreparedLinearSensitivity attribute) rename_by_replacement() (in module openghg_inversions.postprocessing.utils) required_prepared_inputs (openghg_inversions.rhime.AdditiveSigmaSettings property) (openghg_inversions.rhime.FixedErrorSettings property) (openghg_inversions.rhime.PollutionEventSettings property) (openghg_inversions.rhime.specs.AdditiveSigmaSettings property) (openghg_inversions.rhime.specs.FixedErrorSettings property) (openghg_inversions.rhime.specs.PollutionEventSettings property) required_run_params() (in module openghg_inversions.rhime.params) rerun_output() (in module openghg_inversions.hbmcmc.hbmcmc) reset_serialisation_multiindexes() (in module openghg_inversions.serialization) residual_error_method() (in module openghg_inversions.model_error) resize() (openghg_inversions.borrowed.BorrowedNDArray method) resolve_aggregation_error() (in module openghg_inversions.observation_error) resolve_flux_sources() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.params) resolve_model_variable() (in module openghg_inversions.models.components) resolve_rhime_options() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.params) resolve_state_activity() (in module openghg_inversions.models) (in module openghg_inversions.models.state_activity) ResolvedStateActivity (class in openghg_inversions.models) (class in openghg_inversions.models.state_activity) restore_declared_multiindexes() (in module openghg_inversions.serialization) restore_inferencedata_coords() (in module openghg_inversions.models) (in module openghg_inversions.models.coords) restore_serialisation_multiindexes() (in module openghg_inversions.serialization) restriction (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.covariance_products.RetainedProjection attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) (openghg_inversions.basis.RetainedProjection attribute) retained_covariance (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) retained_indices (openghg_inversions.models.PreparedLinearSensitivity property) (openghg_inversions.models.state_activity.PreparedLinearSensitivity property) retained_mean (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) retained_prior (openghg_inversions.rhime.co2.co2_o2_preparation.Co2O2PreparedInputs attribute) (openghg_inversions.rhime.co2.Co2O2PreparedInputs attribute) RetainedProjection (class in openghg_inversions.basis) (class in openghg_inversions.basis.covariance_products) RetainedProjectionStrategy (class in openghg_inversions.basis) (class in openghg_inversions.basis.covariance_products) retrieve_or_reload_rhime_data() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) RhimeMergedData (class in openghg_inversions.inversion_data) (class in openghg_inversions.inversion_data.preparation) RhimeModelBuilder (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.builders) RhimeModelBuilderContext (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.builders) RhimeModelBuildResult (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.builders) RhimeModelSpec (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) RhimeOutputSpec (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) RhimePreparedInputs (class in openghg_inversions.inversion_data) (class in openghg_inversions.inversion_data.preparation) RhimeResult (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.outputs) RhimeRunnerSetup (class in openghg_inversions.rhime.params) RhimeRunSpec (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) RhimeSampler (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.sampling) run_metadata (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) run_ramsden_from_prepared_inputs() (in module openghg_inversions.experimental.ramsden2022) (in module openghg_inversions.experimental.ramsden2022.model) run_rhime() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.standard) run_rhime_co2() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_runner) run_rhime_co2_o2_from_prepared_inputs() (in module openghg_inversions.rhime.co2) (in module openghg_inversions.rhime.co2.co2_o2_runner) run_rhime_from_prepared_inputs() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.prepared) run_rhime_multisector() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.multisector) run_spec (openghg_inversions.rhime.builders.RhimeModelBuilderContext attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.params.RhimeRunnerSetup attribute) (openghg_inversions.rhime.RhimeModelBuilderContext attribute) (openghg_inversions.rhime.RhimeResult attribute) S sample() (in module openghg_inversions.hbmcmc.inversion_pymc) (openghg_inversions.rhime.RhimeSampler method) (openghg_inversions.rhime.sampling.RhimeSampler method) sample_kwargs (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) sample_posterior_predictive (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) sample_prior_predictive (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) sample_rhime_model() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.sampling) sampler (openghg_inversions.experimental.ramsden2022.model.RamsdenResult attribute) (openghg_inversions.experimental.ramsden2022.RamsdenResult attribute) (openghg_inversions.rhime.outputs.RhimeResult attribute) (openghg_inversions.rhime.params.RhimeRunnerSetup attribute) (openghg_inversions.rhime.RhimeResult attribute) sanitize_coords_for_pymc() (in module openghg_inversions.models.coords) sanitize_flux_nonfinite() (in module openghg_inversions.flux_sanitization) save() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs method) (openghg_inversions.inversion_data.RhimePreparedInputs method) (openghg_inversions.postprocessing.inversion_output.InversionOutput method) save_datatree() (in module openghg_inversions.serialization) save_inferencedata() (in module openghg_inversions.serialization) save_inversion_output (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) save_trace (openghg_inversions.rhime.RhimeOutputSpec attribute) (openghg_inversions.rhime.specs.RhimeOutputSpec attribute) scale_satellite_boundary_sensitivity_to_column_signal() (in module openghg_inversions.boundary_sensitivity) schema (openghg_inversions.basis.operators.BasisOperator attribute) (openghg_inversions.native_covariance.SeparableExponentialCovariance attribute) (openghg_inversions.source_covariance.IndependentSourceCovariance attribute) schema_version (openghg_inversions.basis.operators.BasisOperator attribute) (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) (openghg_inversions.native_covariance.SeparableExponentialCovariance attribute) (openghg_inversions.source_covariance.IndependentSourceCovariance attribute) score_split() (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance method) searchsorted() (openghg_inversions.borrowed.BorrowedDataArray method) sectors (openghg_inversions.experimental.ramsden2022.model.RamsdenModelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenModelSpec attribute) (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) SectorSpec (class in openghg_inversions.rhime) (class in openghg_inversions.rhime.specs) select_aggregation_error_mode() (in module openghg_inversions.observation_error) select_gathered_data_array() (in module openghg_inversions.array_ops) select_sources() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) sensitivity (openghg_inversions.models.PreparedLinearSensitivity attribute) (openghg_inversions.models.state_activity.PreparedLinearSensitivity attribute) sensitivity() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) (openghg_inversions.basis.operators.BasisOperator method) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator method) SeparableExponentialCovariance (class in openghg_inversions.native_covariance) set_clevels() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) setfield() (openghg_inversions.borrowed.BorrowedNDArray method) setflags() (openghg_inversions.borrowed.BorrowedNDArray method) shift_measurement_time_to_midpoint() (in module openghg_inversions.postprocessing.make_paris_outputs) sigma (openghg_inversions.native_covariance.SeparableExponentialCovariance property) sigma_freq (openghg_inversions.rhime.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) sigma_freq_anchor (openghg_inversions.rhime.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) sigma_freq_indicies() (in module openghg_inversions.hbmcmc.inversionsetup) sigma_frequency (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) sigma_frequency_anchor (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) sigma_per_site (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) (openghg_inversions.rhime.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) sigma_prior (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) (openghg_inversions.rhime.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.PollutionEventSettings attribute) (openghg_inversions.rhime.specs.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.specs.PollutionEventSettings attribute) SigmaAlignment (class in openghg_inversions.sigma) site_index (openghg_inversions.sigma.SigmaAlignment attribute) site_metadata (openghg_inversions.inversion_data.preparation.RhimePreparedInputs attribute) (openghg_inversions.inversion_data.RhimePreparedInputs attribute) site_names (openghg_inversions.postprocessing.inversion_output.InversionOutput property) site_options (openghg_inversions.inversion_data.preparation.RhimeMergedData attribute) (openghg_inversions.inversion_data.RhimeMergedData attribute) sites (openghg_inversions.hbmcmc.preparation.FixedBasisPreparedData attribute) (openghg_inversions.inversion_data.preparation.RhimeMergedData property) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs property) (openghg_inversions.inversion_data.RhimeMergedData property) (openghg_inversions.inversion_data.RhimePreparedInputs property) (openghg_inversions.model_error.MinimumError attribute) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) six_hr_mean() (in module openghg_inversions.filters) solve() (openghg_inversions.native_covariance.InvertibleNativeCovarianceAction method) (openghg_inversions.native_covariance.SeparableExponentialCovariance method) (openghg_inversions.source_covariance.IndependentSourceCovariance method) sort() (openghg_inversions.borrowed.BorrowedNDArray method) sort_data_vars() (in module openghg_inversions.postprocessing.make_outputs) source (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) source_classes (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) source_covariances (openghg_inversions.source_covariance.IndependentSourceCovariance property) source_dim (openghg_inversions.source_covariance.IndependentSourceCovariance property) source_labels (openghg_inversions.basis.basis_functions.FluxWeightedBasis property) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator property) (openghg_inversions.source_covariance.IndependentSourceCovariance property) sparse_xr_dot() (in module openghg_inversions.array_ops) spatial_dims (openghg_inversions.basis.algorithms.ContrastProximityComponentConsolidation attribute) (openghg_inversions.basis.algorithms.ContrastScoreSplitAcceptance attribute) species (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) split_acceptance (openghg_inversions.basis.algorithms.GreedySplitStrategy attribute) split_by_sectors (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) split_contrast_score() (in module openghg_inversions.basis.algorithms) split_step (openghg_inversions.basis.algorithms.ConnectedBinaryPartitionStep attribute) (openghg_inversions.basis.algorithms.ConnectedComponentPartitionStep attribute) (openghg_inversions.basis.algorithms.GreedySplitStrategy attribute) split_strategy (openghg_inversions.basis.algorithms.ConnectedComponentSplitStrategy attribute) SplitAcceptancePolicy (class in openghg_inversions.basis.algorithms) SplitContrastScore (class in openghg_inversions.basis.algorithms) SplitGeometry (class in openghg_inversions.basis.algorithms) SplitStrategy (class in openghg_inversions.basis.algorithms) standard_model_input_names() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.standard) start_date (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.rhime.RhimeRunSpec attribute) (openghg_inversions.rhime.specs.RhimeRunSpec attribute) start_time (openghg_inversions.postprocessing.inversion_output.InversionOutput property) state (openghg_inversions.models.components.CorrelatedStateResult attribute) (openghg_inversions.models.components.LinearComponentResult attribute) (openghg_inversions.models.components.StateVectorResult attribute) (openghg_inversions.models.CorrelatedStateResult attribute) (openghg_inversions.models.LinearComponentResult attribute) state_activity (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.SectorSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.SectorSpec attribute) state_covariance (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) state_dim (openghg_inversions.basis.layout.BasisLayout attribute) (openghg_inversions.basis.operators.BasisMeta attribute) (openghg_inversions.correlated_state.CorrelatedLognormalPrior attribute) (openghg_inversions.models.CorrelatedLognormalPrior attribute) (openghg_inversions.models.PreparedLinearSensitivity property) (openghg_inversions.models.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.PreparedLinearSensitivity property) (openghg_inversions.models.state_activity.ResolvedStateActivity attribute) state_metadata (openghg_inversions.basis.layout.BasisLayoutResult attribute) (openghg_inversions.basis.operators.BucketBasisOperator property) StateActivity (class in openghg_inversions.models) (class in openghg_inversions.models.state_activity) StateVectorResult (class in openghg_inversions.models.components) StatsFunction (class in openghg_inversions.postprocessing.stats) stdev() (in module openghg_inversions.postprocessing.stats) str_check() (in module openghg_inversions.config.config) strategy (openghg_inversions.basis.covariance_products.NativeCovarianceProducts attribute) (openghg_inversions.basis.covariance_products.RetainedProjection attribute) (openghg_inversions.basis.NativeCovarianceProducts attribute) (openghg_inversions.basis.RetainedProjection attribute) subplot_fmt() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) summary() (in module openghg_inversions.postprocessing.diagnostics) supported_output_formats (openghg_inversions.rhime.builders.RhimeModelBuildResult attribute) (openghg_inversions.rhime.RhimeModelBuildResult attribute) T TargetSplitAcceptancePolicy (class in openghg_inversions.basis.algorithms) tau (openghg_inversions.basis.algorithms.SplitContrastScore attribute) to_dataset() (openghg_inversions.basis.layout.BasisStateMetadata method) (openghg_inversions.correlated_state.CorrelatedLognormalPrior method) (openghg_inversions.models.CorrelatedLognormalPrior method) (openghg_inversions.native_covariance.SeparableExponentialCovariance method) (openghg_inversions.source_covariance.IndependentSourceCovariance method) to_datatree() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) (openghg_inversions.basis.operators.BasisOperator method) (openghg_inversions.basis.operators.BucketBasisOperator method) (openghg_inversions.basis.operators.MultiSourceBucketBasisOperator method) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs method) (openghg_inversions.inversion_data.RhimePreparedInputs method) (openghg_inversions.postprocessing.inversion_output.InversionOutput method) to_dense() (in module openghg_inversions.array_ops) to_dict() (openghg_inversions.postprocessing.countries.CountryRegions method) to_flat_basis() (openghg_inversions.basis.layout.BasisLayout method) to_json() (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata method) to_json_dict() (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata method) to_numpy() (openghg_inversions.borrowed.BorrowedDataArray method) tolerance (openghg_inversions.basis.algorithms.MaxChildPCAEccentricity attribute) total (openghg_inversions.flux_sanitization.FluxNonFiniteMetadata attribute) total_error_output() (in module openghg_inversions.postprocessing.make_outputs) trace (openghg_inversions.postprocessing.inversion_output.InversionOutput attribute) trace_dataset() (openghg_inversions.postprocessing.inversion_output.InversionOutput method) tracer (openghg_inversions.experimental.ramsden2022.model.RamsdenModelSpec attribute) (openghg_inversions.experimental.ramsden2022.model.RamsdenPreparedInputs attribute) (openghg_inversions.experimental.ramsden2022.RamsdenModelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenPreparedInputs attribute) tracer_basis_functions (openghg_inversions.experimental.ramsden2022.model.RamsdenPreparedInputs attribute) (openghg_inversions.experimental.ramsden2022.RamsdenPreparedInputs attribute) tracer_design_reference_ratios (openghg_inversions.experimental.ramsden2022.model.RamsdenPreparedInputs attribute) (openghg_inversions.experimental.ramsden2022.RamsdenPreparedInputs attribute) tracer_flux_source (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) tune (openghg_inversions.rhime.RhimeSampler attribute) (openghg_inversions.rhime.sampling.RhimeSampler attribute) U unbiasedDivergingCmap() (in module openghg_inversions.hbmcmc.hbmcmc_post_process) uncalibrated (openghg_inversions.basis.algorithms.SplitContrastScore attribute) unresolved_observation_covariance (openghg_inversions.coherent_reduction.CoherentGaussianReduction attribute) update_attrs() (in module openghg_inversions.postprocessing.utils) update_log_normal_prior() (in module openghg_inversions.hbmcmc.hbmcmc) use_bc (openghg_inversions.experimental.ramsden2022.model.RamsdenChannelSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenChannelSpec attribute) (openghg_inversions.rhime.RhimeModelSpec attribute) (openghg_inversions.rhime.specs.RhimeModelSpec attribute) use_minimum_error_floor (openghg_inversions.rhime.AdditiveSigmaSettings attribute) (openghg_inversions.rhime.specs.AdditiveSigmaSettings attribute) V validate_complete_observation_covariance() (in module openghg_inversions.observation_error) validate_covariance_coordinates() (in module openghg_inversions.array_ops) validate_model_build_result() (in module openghg_inversions.rhime.builders) validate_multisector_x_prior() (in module openghg_inversions.rhime.params) validate_observation_error_arrays() (in module openghg_inversions.observation_error) validate_output_filename_convention() (in module openghg_inversions.rhime.specs) validate_output_format() (in module openghg_inversions.rhime.specs) validate_output_path_settings() (in module openghg_inversions.rhime.specs) validate_requested_output() (openghg_inversions.rhime.builders.RhimeModelBuildResult method) (openghg_inversions.rhime.RhimeModelBuildResult method) validate_required_params() (in module openghg_inversions.rhime.params) validate_rhime_param_types() (in module openghg_inversions.rhime.params) validate_rhime_params() (in module openghg_inversions.hbmcmc.run_hbmcmc) validate_supported_params() (in module openghg_inversions.rhime.params) validated() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) (openghg_inversions.inversion_data.preparation.RhimePreparedInputs method) (openghg_inversions.inversion_data.RhimePreparedInputs method) values (openghg_inversions.borrowed.BorrowedDataArray property) (openghg_inversions.model_error.MinimumError attribute) variable_name() (openghg_inversions.postprocessing.inversion_output.InversionOutput method) variable_roles (openghg_inversions.postprocessing.inversion_output.InversionOutput property) (openghg_inversions.rhime.builders.RhimeModelBuildResult attribute) (openghg_inversions.rhime.RhimeModelBuildResult attribute) variable_suffix (openghg_inversions.postprocessing.make_outputs.OutputSector attribute) (openghg_inversions.rhime.SectorSpec attribute) (openghg_inversions.rhime.specs.SectorSpec attribute) W weighted_algorithm() (in module openghg_inversions.basis.algorithms) with_flux() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) with_metadata() (openghg_inversions.basis.basis_functions.FluxWeightedBasis method) with_prepared_rhime_sites() (in module openghg_inversions.rhime) (in module openghg_inversions.rhime.preparation) write_netcdf_preserving_bounds_attrs() (in module openghg_inversions.utils) X x_prior (openghg_inversions.experimental.ramsden2022.model.RamsdenSectorSpec attribute) (openghg_inversions.experimental.ramsden2022.RamsdenSectorSpec attribute) (openghg_inversions.rhime.SectorSpec attribute) (openghg_inversions.rhime.specs.SectorSpec attribute) xr_factorize() (in module openghg_inversions.inversion_inputs) xr_unique_inv() (in module openghg_inversions.inversion_inputs) Z zero_sensitivity (openghg_inversions.models.ResolvedStateActivity attribute) (openghg_inversions.models.state_activity.ResolvedStateActivity attribute)